Quantitative proteomics by mass spectrometry

Increased depth and breadth of plasma protein quantitation via two-dimensional liquid chromatography/multiple reaction monitoring-mass spectrometry with labeled peptide standards / Andrew J. Percy ... [et al.]

Quantitative analysis of the Sirt5-regulated lysine succinylation proteome in mammalian cells / Yue Chen

Determining the composition and stability of protein complexes using an integrated label-free and stable isotope labeling strategy / Todd M. Greco, Amanda J. Guise, and Ileana M. Cristea

Label-free quantitation for clinical proteomics / Robert Moulder, Young Ah Goo, and David R. Goodlett

Proteogenomic methods to improve genome annotation / Keshava K. Datta, Anil K. Madugundu, and Harsha Gowda

Mass spectrometry-based quantitative O-GlcNAcomic analysis / Junfeng Ma and Gerald W. Hart

Isolating and quantifying plasma HDL proteins by sequential density gradient ultracentrifugation and targeted proteomics / Clark M. Henderson, Tomas Vaisar, and Andrew N. Hoofnagle

Method for label-free, differential top-down proteomics / Ioanna Ntai ... [et al.]

Multiplexed immunoaffinity enrichment of peptides with anti-peptide antibodies and quantification by stable isotope dilution multiple reaction monitoring mass spectrometry / Eric Kuhn and Steven A. Carr

High-throughput quantitative proteomics enabled by mass defect-based 12-plex DiLeu isobaric tags / Dustin C. Frost and Lingjun Li

Isotopic N,N-Dimethyl leucine (iDiLeu) for absolute quantification of peptides using a standard curve approach / Tyler Greer and Lingjun Li

Selecting optimal peptides for targeted proteomic experiments in human plasma using in vitro synthesized proteins as analytical standards / James G. Bollinger ... [et al.]

Using the CPTAC assay portal to identify and implement highly characterized targeted proteomics assays / Jeffrey R. Whiteaker ... [et al.]

Large-scale and deep quantitative proteome profiling using isobaric labeling coupled with two-dimensional LC-MS/MS / Marina A. Gritsenko ... [et al.]

Multiple and selective reaction monitoring using triple quadrupole mass spectrometer : preclinical large cohort analysis / Qin Fu ... [et al.]

Methods for SWATH" : data independent acquisition on tripleTOF mass spectrometers / Ronald J. Holewinski ... [et al.]

Measurement of phosphorylated peptides with absolute quantification / Raven J. Reddy ... [et al.]

Proteomic analysis of protein turnover by metabolic whole rodent pulse-chase isotopic labeling and shotgun mass spectrometry analysis / Jeffrey N. Savas, Sung Kyu Park, and John R. Yates, III.